I just tested FlashFXP under winNT 4.0 SP6a + IE6 and I was unable to reproduce the problem. Perhaps you have something special installed that might be effecting this behavior?
Applications created with Borland Delphi are a bit funky, The taskbar button is a seperate hidden window.
It sounds like the main window is being restored but not the Application taskbar button window. The tray component is an extension of the application taskbar window and not the main window, and there is no way for it to handle any window events in the main window.
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