Actually to somewhat answer my own question, with 2006/possibly 2005, if you go to options, then Norton Antivirus, then click Internet Worm Protection, you can uncheck "Turn Internet Worm Protection On" it will ask how long you want to turn it off for. So you can temporarily turn this off while you upload/download alot of files with FlashFxp. I also went in to "Program Control" and manually added the FlashFXP exe to "Permit All". Hopefully doing this I will not have to uncheck the Internet Worm Protection, will let you know next time I upload some stuff.
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