After conducting additional tests based on your image I was able to reproduce the problem.
This problem occurs more frequently when the parent folder contains 2 sub-folders or the folder being removed is the last one in the directory list.
There also appears to be a related issue that can cause a folder entry to be added to the directory tree multiple times.
I am still investigating the issue and at the moment I do not have an ETA on a fix but I will make sure it is fixed before the next update.
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