How about after your done load the files you want to move into a queue and enqueue move, create a schedule or save the queue (whatever suits) and when you add more files to that queue just add the file before the enqueue command.
It may be possible that a feature enhancement to run a program after FlashFXP is done and sort this out that way, idk since the main sceduler ffxp uses is the windows scheduler and that can perform actions (which is run program/script.
Submit a Feature request @
https://oss.azurewebsites.net/forum/tracke...er_projectid=4 link this thread and maybe a better suggestion or addition will serve you better.
Or maybe someone will come along and suggest something better.