Core FTP has a local site to site mode which downloads the file to your computer and then uploads it to the other server. Are you using this method or are you doing a direct site to site transfer?
There is one last thing you can try with FlashFXP but its an advanced trick.
Locate the FlashFXP.ini this can be found via the main menu > Help > About > Detail tab
Open it in notepad.exe and under the line [main]
Add this
FxpNatTrick=1
So it would look like
[main]
FxpNatTrick=1
....rest of the settings
Save the flashfxp.ini and start FlashFXP and try again
This sends the PORT command in a way that can sometimes work around router/firewall issues.
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