The suggested way to change this setting is by re-installing, otherwise you need to edit the registry keys manually.
HKEY_LOCAL_MACHINE\SOFTWARE\FlashFXP\3
0 = false
1 = true
AppData = value 0 or 1
AllUsers = value 0 or 1
DataFolder = string, full path to folder.
if "AppData" is true and "AllUsers" is not then the per-user data folder is used.
if "AppData" is false then we check "DataFolder"
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